Overview | Discover datasets | Vital statistics | Health services and population | Surveillance, screening and financing | Provenance and reproducibility
Package: datasus 0.16.1
datasus: An Interface to Brazilian Public Health Data
Retrieves public health data from the Department of Informatics ('DATASUS') of the Brazilian Unified Health System ('Sistema Unico de Saude', 'SUS') through its online tabulation service and open-data catalog. It covers the Mortality Information System ('SIM'), Live Birth Information System ('SINASC'), Hospital Information System of the Unified Health System ('SIH/SUS'), Outpatient Information System of the Unified Health System ('SIA/SUS'), National Register of Health Establishments ('CNES'), Notifiable Diseases Information System ('SINAN'), National Immunization Program ('PNI'), Cancer Information System ('SISCAN'), and Food and Nutrition Surveillance System ('SISVAN'). Contemporary sources from the 'OpenDataSUS' portal include Events Supposedly Attributable to Vaccination or Immunization ('ESAVI'), influenza-like illness notifications from 'e-SUS Notifica', individual vaccination doses, coronavirus disease 2019 (COVID-19) hospital occupancy, and record-level mortality, live-birth and hospital-admission microdata. Curated schemas, selective columns, multipart downloads and chunk processing support memory-efficient analysis of large files. The package also provides grouped epidemiological indicators, confidence intervals, population-denominator joins, epidemiological calendars, moving averages and direct age standardization. An offline reference from the Brazilian Institute of Geography and Statistics (IBGE) supports territorial codes, joins and completion of geographic time series.
Authors:
datasus_0.16.1.tar.gz
datasus_0.16.1.zip(r-4.7-any)datasus_0.16.1.zip(r-4.6-any)datasus_0.16.1.zip(r-4.5-any)
datasus_0.16.1.tgz(r-4.6-any)datasus_0.16.1.tgz(r-4.5-any)
datasus_0.16.1.tar.gz(r-4.7-any)datasus_0.16.1.tar.gz(r-4.6-any)
datasus_0.16.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
datasus/json (API)
| # Install 'datasus' in R: |
| install.packages('datasus', repos = c('https://rpradosiqueira.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rpradosiqueira/datasus/issues
apibrasilbrazildatasushealth-data
Last updated from:fd507d2658. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 137 | ||
| source / vignettes | OK | 207 | ||
| linux-release | OK | 142 | ||
| macos-release | OK | 108 | ||
| macos-oldrel | OK | 106 | ||
| windows-devel | OK | 92 | ||
| windows-release | OK | 91 | ||
| windows-oldrel | OK | 85 | ||
| wasm-release | OK | 98 |
Exports:adicionar_territoriocalcular_indicadorcalcular_taxacalendario_epidemiologicocnescompletar_territoriosdatasus_catalogodatasus_dicionariodatasus_opcoesdatasus_padronizardatasus_provenienciadatasus_territoriosdatasus_validar_esquemaesaviesus_sindrome_gripalextrair_codigo_ibgefinanciamento_susintervalo_taxajuntar_populacaoletalidademedia_movelmicrodados_arquivosmicrodados_baixarmicrodados_catalogomicrodados_lernormalizar_codigo_ibgeocupacao_hospitalaropendatasus_arquivosopendatasus_baixaropendatasus_catalogoopendatasus_leropendatasus_processaropendatasus_recursospadronizar_idadepni_dosespni_imunizacoespopulacao_padraopopulacao_residenteproporcaosemana_epidemiologicasia_producaosih_microdadossih_morbidadesih_producaosimsim_evita10_brufsim_evita10_munsim_evita10_ufsim_evitb10_brufsim_evitb10_munsim_evitb10_ufsim_inf10_brufsim_inf10_munsim_inf10_ufsim_microdadossim_obt10_brufsim_obt10_munsim_obt10_ufsinansinan_denguesinan_mpoxsinascsinasc_microdadossinasc_nv_brufsinasc_nv_munsinasc_nv_ufsiscansisvansivep_gripetaxa_incidenciataxa_mortalidadevalidar_codigo_ibge
Dependencies:askpassbitbit64clicliprcpp11crayoncurldatasusrdplyrgenericsgluehmshttrhttr2jsonlitelifecyclemagrittrmimeopensslpillarpkgconfigprettyunitsprogresspurrrR6readrrlangrvestselectrstringistringrsystibbletidyrtidyselecttzdbutf8vctrsvroomwithrxml2
Accessing DATASUS tables
Last update: 2026-07-26
Started: 2026-07-26
Geography and epidemiological analysis
Overview | Territorial reference | Add geography to observations | Make missing combinations explicit | Join population denominators | Rates, proportions and case fatality | Epidemiological calendar and moving averages | Direct age standardization
Last update: 2026-07-26
Started: 2026-07-26
Introduction to datasus
A R Interface to the DATASUS's data | Installation | Functions | Examples | SIM and SINASC | SIH/SUS, SIA/SUS and CNES | Population, hospital morbidity and SINAN | PNI, SISCAN, SISVAN and financing | OpenDataSUS microdata | Raw DBC/DBF microdata | Territorial reference | Epidemiological analysis | Query conventions
Last update: 2026-07-26
Started: 2017-06-12
Large files, raw microdata and provenance
Overview | Traditional DBC/DBF microdata | Inspect schemas before reading | Selected OpenDataSUS columns | Process CSV files in bounded memory | Cache and provenance | Practical strategy
Last update: 2026-07-26
Started: 2026-07-26
Modern surveillance data from OpenDataSUS
Overview | Search before downloading | Start with selected columns | Standardize an existing data frame | Detect schema drift | Resources split into multiple physical files | Provenance
Last update: 2026-07-26
Started: 2026-07-26
